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  5. Solyc02g021620

Solyc02g021620


Description : Cation-chloride cotransporter 1 (AHRD V3.3 *** CCC1_ORYSJ)


Gene families : OG_42_0003088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g021620
Cluster HCCA clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
Mp3g12910.1 No alias cation:chloride co-transporter (CCC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR018491 SLC12_C 792 987
IPR018491 SLC12_C 660 781
IPR004841 AA-permease/SLC12A_dom 151 626
No external refs found!