Sopen03g011790

Description : Elongation factor Tu GTP binding domain

Gene families : OG_42_0002079 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002079_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g011790
Cluster	HCCA clusters: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
145812	No alias	elongation factor family protein	0.02	Orthogroups_2024-Update
Bradi3g10530	No alias	elongation factor family protein	0.02	Orthogroups_2024-Update
Brara.K00400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Cre13.g606000	No alias	elongation factor family protein	0.02	Orthogroups_2024-Update
Glyma.02G182800	No alias	elongation factor family protein	0.04	Orthogroups_2024-Update
Kfl00065_0260	kfl00065_0260_v1.1	(at5g13650 : 873.0) elongation factor family protein;...	0.02	Orthogroups_2024-Update
MA_138810g0010	No alias	(at5g13650 : 642.0) elongation factor family protein;...	0.02	Orthogroups_2024-Update
Mp2g02820.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	Orthogroups_2024-Update
Pp1s129_193V6	No alias	gtp-binding protein	0.03	Orthogroups_2024-Update
Pp1s4_362V6	No alias	gtp-binding protein	0.03	Orthogroups_2024-Update
Seita.1G127200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G127300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc03g058190	No alias	elongation factor family protein (AHRD V3.3 *** AT5G13650.2)	0.15	Orthogroups_2024-Update
evm.model.tig00000194.55	No alias	(at5g13650 : 656.0) elongation factor family protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000795	TF_GTP-bd_dom	77	268
IPR000640	EFG_V-like	469	554
IPR004161	EFTu-like_2	292	361

External Links

No external refs found!