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  5. Solyc02g022860

Solyc02g022860


Description : FAD-binding Berberine family protein, putative (AHRD V3.3 *** A0A061G993_THECC)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g022860
Cluster HCCA clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
A4A49_00769 No alias reticuline oxidase-like protein 0.02 Orthogroups_2024-Update
Bradi1g38270 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.G01552.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Solyc02g070130 No alias No description available 0.04 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 464 521
IPR006094 Oxid_FAD_bind_N 74 210
No external refs found!