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  5. Sopen03g015780

Sopen03g015780


Description : SNF2 family N-terminal domain


Gene families : OG_42_0005242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g015780
Cluster HCCA clusters: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
At3g12810 No alias Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.03 Orthogroups_2024-Update
GRMZM2G081429 No alias SNF2 domain-containing protein / helicase... 0.04 Orthogroups_2024-Update
GRMZM2G428242 No alias SNF2 domain-containing protein / helicase... 0.03 Orthogroups_2024-Update
Glyma.02G174100 No alias SNF2 domain-containing protein / helicase... 0.04 Orthogroups_2024-Update
Glyma.09G112200 No alias SNF2 domain-containing protein / helicase... 0.04 Orthogroups_2024-Update
PSME_00000156-RA No alias (at3g12810 : 1465.0) Encodes a protein similar to... 0.03 Orthogroups_2024-Update
Pp1s452_20V6 No alias helicase swr1 0.02 Orthogroups_2024-Update
evm.model.tig00000194.26 No alias (at3g12810 : 251.0) Encodes a protein similar to... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 1057 1169
IPR000330 SNF2_N 528 803
IPR014012 HSA_dom 27 93
No external refs found!