1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g016230

Sopen03g016230


Description : Conserved region in glutamate synthase


Gene families : OG_42_0001188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g016230
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
At5g04140 No alias glutamate synthase 1 [Source:TAIR;Acc:AT5G04140] 0.03 Orthogroups_2024-Update
Bradi2g46670 No alias NADH-dependent glutamate synthase 1 0.02 Orthogroups_2024-Update
Cre12.g514050 No alias glutamate synthase 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G022920.11 No alias Fd-dependent glutamate synthase & EC_1.4 oxidoreductase... 0.03 Orthogroups_2024-Update
Mp1g25420.1 No alias NADH-dependent glutamate synthase 0.02 Orthogroups_2024-Update
PSME_00004229-RA No alias (p23225|gltb_maize : 393.0) Ferredoxin-dependent... 0.03 Orthogroups_2024-Update
PSME_00015181-RA No alias (at5g53460 : 3397.0) NADH-dependent glutamate synthase;... 0.02 Orthogroups_2024-Update
Pp1s212_44V6 No alias ferredoxin-dependent glutamate synthase 0.04 Orthogroups_2024-Update
Seita.2G418200.1 No alias Fd-dependent glutamate synthase & EC_1.4 oxidoreductase... 0.02 Orthogroups_2024-Update
Sobic.002G402700.1 No alias Fd-dependent glutamate synthase & EC_1.4 oxidoreductase... 0.02 Orthogroups_2024-Update
Solyc03g063560 No alias Glutamate synthase, putative (AHRD V3.3 *** B9SLP5_RICCO) 0.08 Orthogroups_2024-Update
evm.model.tig00001085.7 No alias (at5g04140 : 348.0) Encodes a gene whose sequence is... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006537 glutamate biosynthetic process IEA InterProScan predictions
BP GO:0006807 nitrogen compound metabolic process IEA InterProScan predictions
MF GO:0015930 glutamate synthase activity IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006982 Glu_synth_centr_N 547 840
IPR002932 Glu_synthdom 900 1283
IPR017932 GATase_2_dom 99 521
IPR002489 Glu_synth_asu_C 1365 1546
No external refs found!