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  4. Sequence
  5. Solyc02g030100

Solyc02g030100


Description : Vacuolar protein sorting-associated protein 54 (AHRD V3.3 *** W9SA63_9ROSA)


Gene families : OG_42_0003381 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003381_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g030100
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_4529.1 No alias (at4g19490 : 91.3) Putative homolog of yeast Vps54.... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!