Sopen03g016810

Description : WRKY DNA -binding domain

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g016810
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05413	No alias	putative wrky transcription factor 2	0.03	Orthogroups_2024-Update
A4A49_15476	No alias	putative wrky transcription factor 4	0.03	Orthogroups_2024-Update
A4A49_21524	No alias	putative wrky transcription factor 20	0.04	Orthogroups_2024-Update
A4A49_32819	No alias	putative wrky transcription factor 31	0.02	Orthogroups_2024-Update
At1g13960	No alias	Probable WRKY transcription factor 4...	0.02	Orthogroups_2024-Update
At1g80840	No alias	Probable WRKY transcription factor 40...	0.02	Orthogroups_2024-Update
At5g52830	No alias	Probable WRKY transcription factor 27...	0.03	Orthogroups_2024-Update
Bradi1g23340	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Bradi2g49906	No alias	WRKY DNA-binding protein 65	0.02	Orthogroups_2024-Update
Bradi4g33370	No alias	WRKY DNA-binding protein 2	0.02	Orthogroups_2024-Update
Brara.I01779.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.08G240800	No alias	WRKY DNA-binding protein 4	0.03	Orthogroups_2024-Update
Glyma.08G325800	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.14G016200	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.18G238200	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.19G094100	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Glyma.19G254800	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g63810	No alias	WRKY80, expressed	0.02	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00034008-RA	No alias	(at5g56270 : 306.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00051522-RA	No alias	(at2g34830 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.002G221600	No alias	zinc-dependent activator protein-1	0.02	Orthogroups_2024-Update
Potri.014G164300	No alias	zinc-dependent activator protein-1	0.02	Orthogroups_2024-Update
Seita.5G468400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G302200.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g079360	No alias	WRKY transcription factor 37	0.02	Orthogroups_2024-Update
Solyc06g066370	No alias	WRKY transcription factor 31	0.02	Orthogroups_2024-Update
Solyc10g009550	No alias	LOW QUALITY:WRKY transcription factor 42	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	215	270
IPR003657	WRKY_dom	388	445

External Links

No external refs found!

Sopen03g016810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation