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  5. Sopen03g021220

Sopen03g021220


Description : Actin


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g021220
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
A4A49_60853 No alias actin 0.03 Orthogroups_2024-Update
At1g49240 No alias Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293] 0.03 Orthogroups_2024-Update
At3g46520 No alias Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497] 0.03 Orthogroups_2024-Update
Bradi4g41850 No alias actin 7 0.04 Orthogroups_2024-Update
Brara.C03705.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Brara.J02361.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Glyma.02G172800 No alias actin 1 0.03 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.03 Orthogroups_2024-Update
Glyma.06G150100 No alias actin 7 0.02 Orthogroups_2024-Update
Glyma.12G063400 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.15G038700 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.03 Orthogroups_2024-Update
HORVU5Hr1G039850.3 No alias actin filament protein 0.03 Orthogroups_2024-Update
MA_9015982g0010 No alias (p13362|act1_orysa : 582.0) Actin-1 - Oryza sativa... 0.02 Orthogroups_2024-Update
PSME_00011258-RA No alias (o81221|act_goshi : 662.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
PSME_00045427-RA No alias (o81221|act_goshi : 556.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.04 Orthogroups_2024-Update
Seita.8G043100.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Sobic.001G022800.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Sobic.001G112600.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Solyc04g011500 No alias actin 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!