Sopen03g022310

Description : Homeobox domain

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g022310
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36238	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
At2g36610	No alias	Homeobox-leucine zipper protein ATHB-22...	0.03	Orthogroups_2024-Update
Bradi4g29380	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Brara.C00651.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01330.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02811.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04578.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.05G175600	No alias	homeobox protein 16	0.03	Orthogroups_2024-Update
Glyma.08G295800	No alias	homeobox 1	0.03	Orthogroups_2024-Update
MA_441783g0010	No alias	(at1g69780 : 97.8) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Solyc02g085630	No alias	Homeobox-leucine zipper family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc04g005800	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen05g002940	No alias	Homeobox domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	24	74
IPR003106	Leu_zip_homeo	76	117

External Links

No external refs found!

Sopen03g022310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation