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  5. Sopen03g022580

Sopen03g022580


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g022580
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_24184 No alias dof zinc finger protein dof3.1 0.02 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.03 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
Glyma.05G037800 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g36900 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g35300 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
PSME_00056573-RA No alias (at5g62940 : 127.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
Potri.016G069300 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Seita.1G290700.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.4G124800.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.002G236600.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.003G301700.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.03 Orthogroups_2024-Update
Solyc04g070960 No alias Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.06 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen03g032010 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen11g030150 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 33 89
No external refs found!