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  5. Sopen03g023020

Sopen03g023020


Description : Seven in absentia protein family


Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g023020
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Bradi3g10650 No alias Protein with RING/U-box and TRAF-like domains 0.03 Orthogroups_2024-Update
GRMZM2G051101 No alias Protein with RING/U-box and TRAF-like domains 0.03 Orthogroups_2024-Update
Glyma.19G256200 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
Pp1s112_190V6 No alias ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.5G005200.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
Sobic.009G087800.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 93 292
No external refs found!