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  5. Sopen03g024310

Sopen03g024310


Description : BP28CT (NUC211) domain


Gene families : OG_42_0003044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g024310
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
438493 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
At3g06530 No alias ARM repeat superfamily protein... 0.06 Orthogroups_2024-Update
Bradi5g17540 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Brara.C03159.1 No alias SSU processome assembly factor *(UTP10) 0.06 Orthogroups_2024-Update
Brara.E03274.1 No alias SSU processome assembly factor *(UTP10) 0.04 Orthogroups_2024-Update
Cre12.g548000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G290200 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Glyma.03G109700 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G024600 No alias ARM repeat superfamily protein 0.06 Orthogroups_2024-Update
Mp1g06160.1 No alias SSU processome assembly factor (UTP10) 0.04 Orthogroups_2024-Update
Potri.003G151500 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Pp1s74_120V6 No alias heat1_arath ame: full=uncharacterized protein at3g06530 0.02 Orthogroups_2024-Update
Seita.7G187400.1 No alias SSU processome assembly factor *(UTP10) 0.05 Orthogroups_2024-Update
Sobic.003G059400.1 No alias SSU processome assembly factor *(UTP10) 0.07 Orthogroups_2024-Update
Solyc03g093480 No alias U3 small nucleolar RNA-associated protein 10 and NUC211... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022125 U3snoRNP10_N 229 353
IPR012954 BP28_C_dom 1835 2005
No external refs found!