Sopen03g024410


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g024410
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Brara.A01769.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G148333 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
HORVU2Hr1G041090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00038114-RA No alias (q9lw48|erf5_nicsy : 94.4) Ethylene-responsive... 0.03 Orthogroups_2024-Update
Potri.011G061700 No alias ethylene response factor 1 0.04 Orthogroups_2024-Update
Seita.2G215500.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Seita.9G516600.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Solyc06g063070 No alias Ethylene Response Factor A.3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 100 150
No external refs found!