Description : ABC transporter transmembrane region
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen03g024530 | |
Cluster | HCCA clusters: Cluster_201 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g62150 | No alias | ABC transporter B family member 21... | 0.05 | Orthogroups_2024-Update | |
Brara.F03152.1 | No alias | subfamily ABCB transporter | 0.04 | Orthogroups_2024-Update | |
Brara.G01961.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
GRMZM2G333183 | No alias | ATP binding cassette subfamily B1 | 0.02 | Orthogroups_2024-Update | |
GRMZM5G833207 | No alias | ATP binding cassette subfamily B4 | 0.02 | Orthogroups_2024-Update | |
GRMZM5G891159 | No alias | P-glycoprotein 20 | 0.02 | Orthogroups_2024-Update | |
Glyma.08G342600 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G090200 | No alias | P-glycoprotein 9 | 0.03 | Orthogroups_2024-Update | |
MA_83806g0010 | No alias | (q6yuu5|mdr_orysa : 1360.0) Putative multidrug... | 0.02 | Orthogroups_2024-Update | |
PSME_00030389-RA | No alias | (at4g25960 : 993.0) P-glycoprotein 2 (PGP2); FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
PSME_00031965-RA | No alias | (q6yuu5|mdr_orysa : 1268.0) Putative multidrug... | 0.02 | Orthogroups_2024-Update | |
PSME_00033760-RA | No alias | (at2g47000 : 911.0) Multidrug resistance P-glycoprotein... | 0.03 | Orthogroups_2024-Update | |
PSME_00042040-RA | No alias | (at3g28345 : 1318.0) ABC transporter family protein;... | 0.02 | Orthogroups_2024-Update | |
Potri.002G019600 | No alias | P-glycoprotein 13 | 0.03 | Orthogroups_2024-Update | |
Potri.018G087100 | No alias | ABC transporter family protein | 0.03 | Orthogroups_2024-Update | |
Potri.018G141300 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s397_2V6 | No alias | multidrug pheromone mdr abc transporter family | 0.02 | Orthogroups_2024-Update | |
Seita.5G031800.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Seita.5G283700.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Sobic.004G073400.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Sobic.006G236700.1 | No alias | auxin efflux transporter *(ABCB19) & subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Solyc06g009290 | No alias | ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen02g032160 | No alias | ABC transporter transmembrane region | 0.03 | Orthogroups_2024-Update | |
Sopen06g004030 | No alias | ABC transporter transmembrane region | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |