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  5. Sopen03g025110

Sopen03g025110


Description : Caspase domain


Gene families : OG_42_0001162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g025110
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_14748 No alias metacaspase-1 0.03 Orthogroups_2024-Update
HORVU1Hr1G071130.1 No alias programmed cell death metacaspase-like regulator *(MCP1) 0.03 Orthogroups_2024-Update
Potri.017G053000 No alias metacaspase 1 0.03 Orthogroups_2024-Update
Potri.017G053100 No alias metacaspase 1 0.03 Orthogroups_2024-Update
Solyc01g105300 No alias Metacaspase-1 (AHRD V3.3 *-* A0A0B2R4L3_GLYSO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 7 31
No external refs found!