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Description : PPR repeat
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen03g026730 | |
| Cluster | HCCA clusters: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 107260 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 80739 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_00959 | No alias | pentatricopeptide repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_05242 | No alias | pentatricopeptide repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| At1g26900 | No alias | Pentatricopeptide repeat-containing protein At1g26900,... | 0.05 | Orthogroups_2024-Update | |
| At5g16860 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | Orthogroups_2024-Update | |
| At5g52850 | No alias | Pentatricopeptide repeat-containing protein At5g52850,... | 0.04 | Orthogroups_2024-Update | |
| Bradi1g21907 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM5G849971 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G043900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G071600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G249400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G006200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G005600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G313200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G288100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G093530.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| MA_16917g0010 | No alias | (at4g13650 : 578.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_28607g0010 | No alias | (at4g02750 : 763.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| MA_68707g0010 | No alias | (at3g24000 : 546.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00001719-RA | No alias | (at4g18750 : 701.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00002375-RA | No alias | (at3g03580 : 696.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00006107-RA | No alias | (at1g11290 : 668.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00006196-RA | No alias | (at1g11290 : 685.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00011507-RA | No alias | (at2g27610 : 676.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
| PSME_00018598-RA | No alias | (at1g11290 : 726.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00030552-RA | No alias | (at4g18750 : 502.0) Encodes a pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00044871-RA | No alias | (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00046347-RA | No alias | (at2g13600 : 438.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057058-RA | No alias | (at3g12770 : 592.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057248-RA | No alias | (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G075800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G191000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.004G124400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.012G135600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.7G277600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G312700.1 | No alias | RNA editing factor *(MEF25) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G347100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G292300.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G358900.3 | No alias | RNA editing factor *(OTP90) | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G380100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.005G210700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G137800.3 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G238700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g112200 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g065030 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc02g079380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g088650 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g116000 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc05g006800 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc05g013200 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc09g010070 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g008570 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc11g011860 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |