Sopen03g028750

Description : EF hand

Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g028750
Cluster	HCCA clusters: Cluster_218

Target	Alias	Description	ECC score	Gene Family Method
Brara.B00936.1	No alias	calcium sensor (CML) & calcium sensor (CaM)	0.03	Orthogroups_2024-Update
Brara.C00973.1	No alias	calcium sensor (CML) & calcium sensor (CaM)	0.04	Orthogroups_2024-Update
Brara.J01511.1	No alias	calcium sensor (CML) & calcium sensor (CaM)	0.03	Orthogroups_2024-Update
Glyma.14G040600	No alias	calmodulin 5	0.03	Orthogroups_2024-Update
Sobic.001G390300.1	No alias	calcium sensor (CML) & calcium sensor (CaM)	0.03	Orthogroups_2024-Update
Solyc03g098050	No alias	Calmodulin 6	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	13	73
IPR002048	EF_hand_dom	83	146

External Links

No external refs found!