Sopen03g028910

Description : hypothetical protein

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g028910
Cluster	HCCA clusters: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
84488	No alias	cyclic nucleotide-gated cation channel 4	0.02	Orthogroups_2024-Update
A4A49_32794	No alias	cyclic nucleotide-gated ion channel 1	0.03	Orthogroups_2024-Update
At1g15990	No alias	Putative cyclic nucleotide-gated ion channel 7...	0.03	Orthogroups_2024-Update
At1g19780	No alias	Putative cyclic nucleotide-gated ion channel 8...	0.02	Orthogroups_2024-Update
At3g48010	No alias	Probable cyclic nucleotide-gated ion channel 16...	0.03	Orthogroups_2024-Update
Bradi3g47900	No alias	cyclic nucleotide-gated channel 15	0.02	Orthogroups_2024-Update
HORVU1Hr1G018730.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Potri.018G097600	No alias	cyclic nucleotide-gated channel 17	0.02	Orthogroups_2024-Update
Potri.019G080400	No alias	cyclic nucleotide-gated channel 18	0.02	Orthogroups_2024-Update
Solyc08g069140	No alias	Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	198	522

External Links

No external refs found!