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  5. Sopen03g028990

Sopen03g028990


Description : Piwi domain


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen03g028990
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Brara.J01530.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
Glyma.01G053100 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Glyma.14G041100 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G045050.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10427420g0010 No alias (at1g48410 : 253.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update
Seita.7G201100.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 Orthogroups_2024-Update
Solyc12g006790 No alias Argonaute10b 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032472 ArgoL2 628 674
IPR014811 ArgoL1 436 485
IPR024357 Argonaut_Gly-rich 160 272
IPR003165 Piwi 779 1098
IPR032473 Argonaute_Mid_dom 685 759
IPR032474 Argonaute_N 292 426
IPR003100 PAZ_dom 492 617
No external refs found!