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  5. Sopen03g029070

Sopen03g029070


Description : Myb-like DNA-binding domain


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g029070
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
78045 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_01132 No alias protein reveille 8 0.06 Orthogroups_2024-Update
A4A49_11843 No alias protein reveille 6 0.04 Orthogroups_2024-Update
At2g46830 No alias Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] 0.1 Orthogroups_2024-Update
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.06 Orthogroups_2024-Update
At4g01280 No alias Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5] 0.03 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.03 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.03 Orthogroups_2024-Update
At5g52660 No alias Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3] 0.02 Orthogroups_2024-Update
Bradi1g29680 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.A03523.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.E00100.1 No alias circadian clock core oscillator protein *(LHY/CCA1) &... 0.05 Orthogroups_2024-Update
Brara.E03078.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
Brara.J02851.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
GRMZM2G029850 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G145041 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G170148 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G170322 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G241000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G177300 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.09G167900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G048500 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G211643 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G210600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G217700 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.20G162800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G001830.3 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
LOC_Os02g46030 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Orthogroups_2024-Update
Potri.006G133000 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.016G083900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G144800 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Pp1s325_68V6 No alias lhy protein 0.03 Orthogroups_2024-Update
Seita.1G272700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
Seita.4G004600.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Seita.4G288100.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G275700.1 No alias transcription factor *(REVEILLE) 0.02 Orthogroups_2024-Update
Solyc01g095030 No alias Myb family transcription factor family protein (AHRD... 0.05 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.19 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.2 Orthogroups_2024-Update
evm.model.contig_2210.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 55 98
No external refs found!