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  5. Sopen03g029170

Sopen03g029170


Description : Glycosyl hydrolases family 16


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g029170
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
119243 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
A4A49_26737 No alias xyloglucan endotransglucosylasehydrolase protein 15 0.02 Orthogroups_2024-Update
Brara.A02345.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Brara.B01205.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Brara.C02767.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Brara.J01168.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Glyma.09G062600 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.11G044800 No alias xyloglucan endotransglucosylase/hydrolase 6 0.02 Orthogroups_2024-Update
Glyma.15G169100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.18G003200 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Glyma.18G165700 No alias xyloglucan endotransglucosylase/hydrolase 2 0.03 Orthogroups_2024-Update
HORVU4Hr1G028720.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Mp8g18980.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00000084-RA No alias (at2g36870 : 349.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00030735-RA No alias (at4g37800 : 286.0) xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00040364-RA No alias (at4g03210 : 145.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
Potri.006G160700 No alias xyloglucan endotransglucosylase/hydrolase 26 0.03 Orthogroups_2024-Update
Solyc09g008320 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g007250 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010713 XET_C 241 281
IPR000757 GH16 25 201
No external refs found!