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  5. Sopen03g029680

Sopen03g029680


Description : tRNA synthetases class II (D, K and N)


Gene families : OG_42_0001608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001608_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g029680
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Brara.C01232.1 No alias asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.04 Orthogroups_2024-Update
Cre03.g193800 No alias Class II aminoacyl-tRNA and biotin synthetases... 0.03 Orthogroups_2024-Update
Glyma.05G224000 No alias Class II aminoacyl-tRNA and biotin synthetases... 0.03 Orthogroups_2024-Update
Seita.2G316100.1 No alias asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.04 Orthogroups_2024-Update
Sobic.002G304100.1 No alias asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 212 565
IPR004365 NA-bd_OB_tRNA 117 195
No external refs found!