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  5. Sopen03g030240

Sopen03g030240


Description : Bromodomain


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g030240
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Brara.H02453.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Glyma.04G193800 No alias nuclear protein X1 0.03 Orthogroups_2024-Update
HORVU3Hr1G015760.6 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
HORVU7Hr1G074620.7 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
MA_10429630g0020 No alias (at5g63320 : 148.0) Encodes NPX1 (Nuclear Protein X1), a... 0.03 Orthogroups_2024-Update
MA_10435152g0020 No alias (at5g63320 : 289.0) Encodes NPX1 (Nuclear Protein X1), a... 0.03 Orthogroups_2024-Update
Potri.011G077100 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
Seita.8G053600.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.005G059100.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
evm.model.contig_2143.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_444.31 No alias (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00000632.12 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027353 NET_dom 365 427
IPR001487 Bromodomain 214 298
No external refs found!