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  5. Sopen03g030320

Sopen03g030320


Description : AMP-binding enzyme


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g030320
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
232017 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
A4A49_31911 No alias 4-coumarate--coa ligase-like 6 0.03 Orthogroups_2024-Update
At5g63380 No alias 4-coumarate--CoA ligase-like 9... 0.02 Orthogroups_2024-Update
Bradi2g57860 No alias AMP-dependent synthetase and ligase family protein 0.05 Orthogroups_2024-Update
Bradi3g05750 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.02 Orthogroups_2024-Update
Brara.C03823.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.F01459.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Brara.G01098.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Glyma.01G232400 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Glyma.13G372000 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432069g0020 No alias (at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00010615-RA No alias (at1g20510 : 540.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00042414-RA No alias (at1g20510 : 636.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Potri.004G102000 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Potri.008G031500 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Potri.017G035100 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.04 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.9G537100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 53 450
IPR025110 AMP-bd_C 459 534
No external refs found!