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  5. Sopen03g030810

Sopen03g030810


Description : Pectate lyase


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g030810
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
407495 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_23917 No alias putative pectate lyase 13 0.03 Orthogroups_2024-Update
A4A49_35755 No alias putative pectate lyase p59 0.03 Orthogroups_2024-Update
A4A49_40134 No alias putative pectate lyase p59 0.02 Orthogroups_2024-Update
At1g30350 No alias Probable pectate lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G4] 0.03 Orthogroups_2024-Update
At4g13710 No alias Probable pectate lyase 15... 0.03 Orthogroups_2024-Update
At4g24780 No alias Probable pectate lyase 18... 0.03 Orthogroups_2024-Update
At5g15110 No alias Pectate lyase family protein [Source:TAIR;Acc:AT5G15110] 0.03 Orthogroups_2024-Update
Brara.B01305.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.D00702.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.F00890.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.G02735.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.I00732.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Brara.I04991.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Glyma.05G044000 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.17G126500 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.18G255900 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.19G020200 No alias Pectate lyase family protein 0.02 Orthogroups_2024-Update
Glyma.20G077300 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G112600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G002880.2 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
MA_101171g0010 No alias (at1g67750 : 487.0) Pectate lyase family protein;... 0.04 Orthogroups_2024-Update
MA_10394547g0010 No alias (at4g22090 : 188.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_203992g0010 No alias (at4g24780 : 544.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00009672-RA No alias (at5g48900 : 608.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00036578-RA No alias (at5g48900 : 578.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Potri.003G175900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G007300 No alias root hair specific 14 0.02 Orthogroups_2024-Update
Potri.008G032700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G182200 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Potri.011G008100 No alias root hair specific 14 0.03 Orthogroups_2024-Update
Potri.015G087800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc02g067450 No alias Pectate lyase (AHRD V3.3 *** M1A9L8_SOLTU) 0.03 Orthogroups_2024-Update
Solyc03g058910 No alias Pectate lyase (AHRD V3.3 *** M1A3P9_SOLTU) 0.08 Orthogroups_2024-Update
Solyc03g111690 No alias Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 14 135
No external refs found!