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  5. Sopen03g031440

Sopen03g031440


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g031440
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
438800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
A4A49_10444 No alias e3 ubiquitin-protein ligase atl9 0.03 Orthogroups_2024-Update
A4A49_18667 No alias ring-h2 finger protein atl18 0.03 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.05 Orthogroups_2024-Update
A4A49_29196 No alias ring-h2 finger protein atl72 0.03 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.03 Orthogroups_2024-Update
A4A49_36944 No alias ring-h2 finger protein atl52 0.03 Orthogroups_2024-Update
At1g53820 No alias RING-H2 finger protein ATL60... 0.03 Orthogroups_2024-Update
At1g72200 No alias RING-H2 finger protein ATL11... 0.03 Orthogroups_2024-Update
At3g10910 No alias RING-H2 finger protein ATL72... 0.02 Orthogroups_2024-Update
At4g09100 No alias RING-H2 finger protein ATL39... 0.02 Orthogroups_2024-Update
At5g10380 No alias E3 ubiquitin-protein ligase RING1... 0.04 Orthogroups_2024-Update
Bradi1g06330 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g32700 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g38493 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g13960 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g19960 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00708.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.03 Orthogroups_2024-Update
Brara.A03446.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C02593.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03025.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03092.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E01533.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E03386.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G00123.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.02 Orthogroups_2024-Update
Brara.G03117.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.H00897.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.K00650.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Cre11.g476250 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Cre16.g651400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G026562 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G031280 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G108085 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G478553 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G017300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G210400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G239900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G015200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G015200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G121400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G232800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G157400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G025700 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.19G010400 No alias hypoxia-responsive family protein / zinc finger... 0.06 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU0Hr1G021450.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G074210.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.03 Orthogroups_2024-Update
HORVU2Hr1G079170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G105980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G028370.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU5Hr1G082830.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G067020.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g58540 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g37740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g48310 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g39940 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02350 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_101154g0010 No alias (at3g16720 : 130.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_10426834g0010 No alias (at1g49230 : 115.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_12363g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_1252g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_37578g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_44828g0020 No alias (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... 0.02 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_569551g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_611616g0010 No alias (at1g49230 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_69343g0010 No alias (at1g49230 : 137.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_6934973g0010 No alias (at5g01880 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_932090g0010 No alias (at3g05200 : 171.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00003023-RA No alias (at1g72200 : 141.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00051567-RA No alias (at3g16720 : 108.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
Potri.001G279200 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Potri.001G309600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G093100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G113200 No alias receptor homology region transmembrane domain ring H2... 0.03 Orthogroups_2024-Update
Potri.005G160900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.009G110000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G076800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s71_157V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.05 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.2G037300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G095300.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G109900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G184500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.009G110200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.04 Orthogroups_2024-Update
Solyc04g014220 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.02 Orthogroups_2024-Update
Solyc04g082690 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.04 Orthogroups_2024-Update
Solyc11g005310 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Sopen04g036320 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00020684.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 118 161
No external refs found!