1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g031450

Sopen03g031450


Description : DEAD/DEAH box helicase


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g031450
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
At3g06480 No alias DEAD-box ATP-dependent RNA helicase 40... 0.02 Orthogroups_2024-Update
At5g63120 No alias DEAD-box ATP-dependent RNA helicase 30... 0.07 Orthogroups_2024-Update
Brara.B00559.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre12.g540200 No alias DEA(D/H)-box RNA helicase family protein 0.07 Orthogroups_2024-Update
Mp4g22900.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.04 Orthogroups_2024-Update
Potri.010G152400 No alias DEAD box RNA helicase family protein 0.03 Orthogroups_2024-Update
Solyc01g057760 No alias RNA helicase DEAD2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 254 424
IPR001650 Helicase_C 460 539
No external refs found!