1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g032650

Solyc02g032650


Description : Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A072U6S8_MEDTR)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g032650
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
At1g72900 No alias Similar to part of disease resistance protein... 0.03 Orthogroups_2024-Update
At4g09430 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g41540 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g49140 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Brara.A03518.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.G02340.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.I03176.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.K00715.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.K01764.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Glyma.01G125400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G264300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G135600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.15G152400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Orthogroups_2024-Update
Glyma.16G128020 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.U033205 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
PSME_00041991-RA No alias (at1g27180 : 111.0) disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00055283-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.001G363220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.013G097000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T077400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Sopen12g032810 No alias TIR domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 211 466
IPR000157 TIR_dom 18 194
No external refs found!