Sopen03g032010


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g032010
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
A4A49_04752 No alias dof zinc finger protein dof3.5 0.02 Orthogroups_2024-Update
A4A49_12312 No alias dof zinc finger protein dof2.1 0.03 Orthogroups_2024-Update
At3g45610 No alias Dof zinc finger protein DOF3.2... 0.03 Orthogroups_2024-Update
Brara.C01053.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.E01618.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I00711.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Glyma.02G092700 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.03G007950 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.06G182200 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.08G228900 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
HORVU4Hr1G059590.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU5Hr1G113220.6 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os10g35300 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_123810g0010 No alias (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
MA_459791g0010 No alias (at1g28310 : 129.0) Dof-type zinc finger DNA-binding... 0.02 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.04 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
Potri.003G034200 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Potri.004G046100 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Pp1s12_364V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s68_214V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.2G326900.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.5G324400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G178900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g065290 No alias Dof zinc finger protein2 0.03 Orthogroups_2024-Update
Solyc02g090220 No alias Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS) 0.03 Orthogroups_2024-Update
Solyc03g082840 No alias Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) 0.04 Orthogroups_2024-Update
Solyc06g071480 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.02 Orthogroups_2024-Update
Sopen03g022580 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g034940 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 66 122
No external refs found!