Sopen03g032810

Description : E2F/DP family winged-helix DNA-binding domain

Gene families : OG_42_0002758 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002758_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g032810
Cluster	HCCA clusters: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
421405	No alias	DP-E2F-like 1	0.02	Orthogroups_2024-Update
At3g01330	No alias	E2F transcription factor-like E2FF...	0.04	Orthogroups_2024-Update
Brara.A02394.1	No alias	E2F-type transcription factor & cell cycle interphase...	0.06	Orthogroups_2024-Update
Glyma.17G093600	No alias	DP-E2F-like 1	0.04	Orthogroups_2024-Update
Kfl00334_0090	kfl00334_0090_v1.1	(at3g48160 : 187.0) E2F-like protein, an inhibitor of...	0.03	Orthogroups_2024-Update
MA_2814g0010	No alias	(at3g48160 : 246.0) E2F-like protein, an inhibitor of...	0.07	Orthogroups_2024-Update
Potri.015G070300	No alias	DP-E2F-like 1	0.03	Orthogroups_2024-Update
Solyc03g113760	No alias	E2F transcription factor-like E2FE (AHRD V3.3 *** W9SXR3_9ROSA)	0.11	Orthogroups_2024-Update
Sopen02g032070	No alias	E2F/DP family winged-helix DNA-binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription factor complex	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003316	E2F_WHTH_DNA-bd_dom	18	82
IPR003316	E2F_WHTH_DNA-bd_dom	154	232

External Links

No external refs found!

Sopen03g032810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation