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  5. Sopen03g033270

Sopen03g033270


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g033270
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi3g52160 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.F00391.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.02 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.12G047300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G157400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g61470 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g35329 No alias RING-H2 finger protein ATL3F, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_37930g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.002G165200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G209600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G255200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.010G235200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G136200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G010600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Sobic.004G109100.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g081040 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc02g086950 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 75 118
No external refs found!