Sopen03g033540

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g033540
Cluster	HCCA clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
At1g12630	No alias	Ethylene-responsive transcription factor ERF027...	0.04	Orthogroups_2024-Update
At1g43160	No alias	Ethylene-responsive transcription factor RAP2-6...	0.03	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.06	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g52380	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
Bradi3g08790	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g17620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.A00511.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.B03778.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.H01576.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
Brara.I01789.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.I03370.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.I05601.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G039870	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
GRMZM2G060876	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G080516	No alias	ethylene responsive element binding factor 1	0.04	Orthogroups_2024-Update
GRMZM2G099326	No alias	ethylene response factor 7	0.03	Orthogroups_2024-Update
Glyma.01G231200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.03G116700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.04G084000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G049900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.05G214400	No alias	cytokinin response factor 2	0.02	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G079600	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.19G192400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.19G253100	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
HORVU0Hr1G016370.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_100577g0010	No alias	(at5g21960 : 112.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_10436317g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_356609g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_71018g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_7166g0010	No alias	(at3g60490 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_9294379g0010	No alias	(at5g11590 : 120.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_98464g0010	No alias	(at1g78080 : 107.0) Encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00014384-RA	No alias	(at5g21960 : 93.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00052455-RA	No alias	(at1g19210 : 114.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G155700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G136300	No alias	cytokinin response factor 2	0.03	Orthogroups_2024-Update
Potri.019G075600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Seita.1G027200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G031600.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.4G039700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G225700.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc04g007180	No alias	No description available	0.03	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.03	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.02	Orthogroups_2024-Update
Sopen04g006680	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g033990	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	32	81

External Links

No external refs found!

Sopen03g033540

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation