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  5. Solyc02g032850

Solyc02g032850


Description : Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g032850
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Brara.D00590.1 No alias effector-triggered immunity co-regulator *(PAD4) 0.03 Orthogroups_2024-Update
MA_101621g0020 No alias (at3g48090 : 244.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_30999g0010 No alias (at3g48090 : 224.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_40151g0020 No alias (at3g52430 : 166.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
PSME_00003546-RA No alias (at3g52430 : 231.0) Encodes a lipase-like gene that is... 0.02 Orthogroups_2024-Update
PSME_00025243-RA No alias (at3g48080 : 209.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00039391-RA No alias (at3g48080 : 233.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 90 195
No external refs found!