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  5. Sopen03g033760

Sopen03g033760


Description : WD domain, G-beta repeat


Gene families : OG_42_0004602 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g033760
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18270 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Cre16.g652950 No alias transducin family protein / WD-40 repeat family protein 0.06 Orthogroups_2024-Update
Glyma.04G158400 No alias transducin family protein / WD-40 repeat family protein 0.06 Orthogroups_2024-Update
Glyma.06G206800 No alias transducin family protein / WD-40 repeat family protein 0.07 Orthogroups_2024-Update
Kfl00066_0340 kfl00066_0340_v1.1 (at3g42660 : 451.0) transducin family protein / WD-40... 0.09 Orthogroups_2024-Update
MA_10431892g0020 No alias (at3g42660 : 692.0) transducin family protein / WD-40... 0.07 Orthogroups_2024-Update
PSME_00009596-RA No alias (p49036|sus2_maize : 356.0) Sucrose synthase 2 (EC... 0.03 Orthogroups_2024-Update
PSME_00044301-RA No alias (at3g42660 : 276.0) transducin family protein / WD-40... 0.02 Orthogroups_2024-Update
Seita.7G065800.1 No alias regulatory protein ELP1 of PRC1 histone... 0.08 Orthogroups_2024-Update
Sobic.010G147700.1 No alias regulatory protein ELP1 of PRC1 histone... 0.15 Orthogroups_2024-Update
Solyc03g114690 No alias WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO) 0.18 Orthogroups_2024-Update
evm.model.contig_610.3 No alias (at3g42660 : 146.0) transducin family protein / WD-40... 0.02 Orthogroups_2024-Update
evm.model.tig00020780.19 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 201 288
IPR022100 Mcl1_mid 426 708
IPR001680 WD40_repeat 54 89
IPR001680 WD40_repeat 140 173
No external refs found!