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  5. Sopen03g033910

Sopen03g033910


Description : K-box region


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g033910
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
A4A49_09228 No alias mads-box protein jointless 0.07 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.04 Orthogroups_2024-Update
At3g57230 No alias Agamous-like MADS-box protein AGL16... 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.02 Orthogroups_2024-Update
Bradi2g38695 No alias MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g59191 No alias AGAMOUS-like 19 0.05 Orthogroups_2024-Update
Brara.B03164.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.B03768.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C01460.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02757.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G044408 No alias AGAMOUS-like 44 0.02 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.05G148700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.15G088600 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
PSME_00014706-RA No alias (at2g45660 : 101.0) Controls flowering and is required... 0.02 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.04 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Pp1s34_373V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Seita.2G266600.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Seita.4G093200.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G036500.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G156800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g106710 No alias Transcription factor, MADS-box (AHRD V3.3 *** A0A103YIH6_CYNCS) 0.02 Orthogroups_2024-Update
Solyc05g015730 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 90 172
No external refs found!