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  5. Sopen03g033930

Sopen03g033930


Description : SBP domain


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g033930
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Bradi4g34667 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Brara.E01547.1 No alias SBP-type transcription factor 0.05 Orthogroups_2024-Update
Brara.G01764.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02852.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.H02059.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.02 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.03G117500 No alias squamosa promoter binding protein-like 8 0.04 Orthogroups_2024-Update
Glyma.19G094000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
MA_20537g0010 No alias (at1g02065 : 148.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G055900 No alias squamosa promoter binding protein-like 2 0.03 Orthogroups_2024-Update
Potri.002G142200 No alias squamosa promoter binding protein-like 8 0.02 Orthogroups_2024-Update
Potri.004G046700 No alias squamosa promoter binding protein-like 3 0.02 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Pp1s252_40V6 No alias squamosa promoter-binding 0.03 Orthogroups_2024-Update
Seita.5G432500.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G247800.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g015510 No alias Squamosa promoter-binding protein 10 0.04 Orthogroups_2024-Update
Solyc10g018780 No alias Squamosa promoter binding protein 8a 0.03 Orthogroups_2024-Update
Sopen10g029320 No alias SBP domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 168 241
No external refs found!