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Description : PPR repeat
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen03g034780 | |
| Cluster | HCCA clusters: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 130453 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 88824 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g36010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g68870 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g37120 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.C03290.1 | No alias | RNA editing factor *(MEF12) | 0.03 | Orthogroups_2024-Update | |
| Brara.D02053.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.J02104.1 | No alias | RNA editing factor *(RARE1) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G000674 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G026400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G127400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G213800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G016600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G084700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G272100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G035600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.17G209700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G085900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G110410.2 | No alias | RNA editing factor *(OTP72) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g04390 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_16823g0010 | No alias | (at1g11290 : 694.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_205762g0010 | No alias | (at4g02750 : 416.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_2473g0010 | No alias | (at3g12770 : 597.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| MA_59148g0010 | No alias | (at1g11290 : 604.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_73205g0010 | No alias | (at2g13600 : 457.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| MA_7379g0020 | No alias | (at4g02750 : 568.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014659-RA | No alias | (at1g11290 : 712.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00022404-RA | No alias | (at3g57430 : 647.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
| PSME_00036890-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| Potri.004G205900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.006G211400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G065500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.016G075000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s178_15V6 | No alias | T1B8.1; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
| Pp1s276_42V6 | No alias | F4I10.100; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
| Seita.6G130100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.7G277600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G149100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G212200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G312700.1 | No alias | RNA editing factor *(MEF25) | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G111700.6 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G172500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G385200.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Sobic.002G389200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G047400.1 | No alias | RNA editing factor *(OTP81) | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G217900.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G146400.4 | No alias | RNA editing factor *(MEF12) | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G208400.1 | No alias | RNA editing factor *(REME1) | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G041000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G155400.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g006920 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g090510 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g095160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g097670 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc02g088650 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g006990 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc11g071370 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |