1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g035290

Sopen03g035290


Description : Regulator of chromosome condensation (RCC1) repeat


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g035290
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
A4A49_35982 No alias ultraviolet-b receptor uvr8 0.03 Orthogroups_2024-Update
Glyma.11G168801 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
HORVU1Hr1G056870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g31920 No alias FYVE zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00003947-RA No alias (at5g19420 : 205.0) Regulator of chromosome condensation... 0.02 Orthogroups_2024-Update
Potri.003G197600 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Seita.7G212700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g001590 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 595 642
IPR000408 Reg_chr_condens 370 422
IPR000408 Reg_chr_condens 319 366
IPR000408 Reg_chr_condens 426 474
IPR000408 Reg_chr_condens 542 588
IPR000408 Reg_chr_condens 492 538
IPR000306 Znf_FYVE 652 712
No external refs found!