Sopen03g035340

Description : Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Gene families : OG_42_0001013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g035340
Cluster	HCCA clusters: Cluster_305

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU3Hr1G081660.23	No alias	PHD finger transcription factor	0.02	Orthogroups_2024-Update
PSME_00012448-RA	No alias	(at1g33420 : 466.0) RING/FYVE/PHD zinc finger...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	7	29
IPR000571	Znf_CCCH	93	118
IPR000571	Znf_CCCH	252	277
IPR019787	Znf_PHD-finger	950	986

External Links

No external refs found!