1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g035520

Sopen03g035520


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g035520
Cluster HCCA clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_07545 No alias pathogenesis-related genes transcriptional activator pti6 0.03 Orthogroups_2024-Update
A4A49_16579 No alias ethylene-responsive transcription factor abr1 0.02 Orthogroups_2024-Update
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.03 Orthogroups_2024-Update
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.02 Orthogroups_2024-Update
At1g28160 No alias Ethylene-responsive transcription factor ERF087... 0.03 Orthogroups_2024-Update
At1g74930 No alias Ethylene-responsive transcription factor ERF018... 0.02 Orthogroups_2024-Update
Bradi1g36590 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g52370 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Bradi3g50490 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.02 Orthogroups_2024-Update
Brara.H01777.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
GRMZM2G376255 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G105000 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.07G114000 No alias ethylene-responsive element binding factor 13 0.05 Orthogroups_2024-Update
Glyma.07G244867 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g52670 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_502153g0010 No alias (at5g44210 : 94.4) encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
MA_78784g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00009547-RA No alias (at4g17500 : 103.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00052454-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00053215-RA No alias (at4g17490 : 92.0) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Potri.003G161000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G136300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s124_33V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s162_92V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.4G041600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.04 Orthogroups_2024-Update
Sobic.004G319700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G051200.2 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sopen02g035420 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g005140 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen06g033990 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 50
No external refs found!