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  5. Sopen03g035780

Sopen03g035780


Description : Ion transport protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g035780
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_19266 No alias putative cyclic nucleotide-gated ion channel 8 0.02 Orthogroups_2024-Update
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.02 Orthogroups_2024-Update
Brara.I04465.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.03 Orthogroups_2024-Update
Glyma.08G219300 No alias cyclic nucleotide gated channel 8 0.03 Orthogroups_2024-Update
LOC_Os06g33570 No alias cyclic nucleotide-gated ion channel 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g28260 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G127300 No alias cyclic nucleotide-gated channel 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 523 611
IPR005821 Ion_trans_dom 102 426
No external refs found!