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  5. Sopen03g036030

Sopen03g036030


Description : Nuclear protein 96


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g036030
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
139717 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.02 Orthogroups_2024-Update
Bradi1g73110 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.06 Orthogroups_2024-Update
Cre02.g086887 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.04 Orthogroups_2024-Update
GRMZM2G344924 No alias Nucleoporin autopeptidase 0.02 Orthogroups_2024-Update
Glyma.14G005800 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.03 Orthogroups_2024-Update
HORVU4Hr1G075390.1 No alias scaffold nucleoporin of nuclear pore complex 0.07 Orthogroups_2024-Update
Seita.9G523200.1 No alias scaffold nucleoporin of nuclear pore complex 0.04 Orthogroups_2024-Update
Solyc03g117120 No alias Nuclear pore complex Nup98-Nup96 (AHRD V3.3 *** A0A0B0P3R7_GOSAR) 0.06 Orthogroups_2024-Update
evm.model.tig00000663.22 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0006913 nucleocytoplasmic transport IEA InterProScan predictions
MF GO:0017056 structural constituent of nuclear pore IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 43 184
IPR021967 Nup96 569 849
No external refs found!