1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g036040

Sopen03g036040


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g036040
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
At1g43160 No alias Ethylene-responsive transcription factor RAP2-6... 0.02 Orthogroups_2024-Update
At1g44830 No alias Ethylene-responsive transcription factor ERF014... 0.02 Orthogroups_2024-Update
At3g23230 No alias Ethylene-responsive transcription factor ERF098... 0.02 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.03 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.05G092800 No alias cooperatively regulated by ethylene and jasmonate 1 0.02 Orthogroups_2024-Update
Glyma.06G042100 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G122600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46400 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10031781g0010 No alias (at5g51190 : 100.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00033961-RA No alias (at5g21960 : 122.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.011G056900 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
Potri.019G088000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Pp1s7_352V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G324400.2 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Solyc01g065980 No alias Ethylene Response Factor E.4 0.03 Orthogroups_2024-Update
Solyc02g077370 No alias Ethylene Response Factor C.5 0.03 Orthogroups_2024-Update
Solyc02g090800 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.01 Orthogroups_2024-Update
Solyc10g050970 No alias Ethylene Response Factor D.4 0.01 Orthogroups_2024-Update
Solyc11g042560 No alias Ethylene-responsive transcription factor ERF021 family... 0.02 Orthogroups_2024-Update
Sopen02g035420 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g029210 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!