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  5. Sopen03g036690

Sopen03g036690


Description : UBA/TS-N domain


Gene families : OG_42_0001189 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g036690
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Brara.C02993.1 No alias ubiquitin-proteasome shuttle factor *(RAD23) 0.02 Orthogroups_2024-Update
GRMZM2G105772 No alias Rad23 UV excision repair protein family 0.03 Orthogroups_2024-Update
Glyma.10G275100 No alias Rad23 UV excision repair protein family 0.03 Orthogroups_2024-Update
LOC_Os08g33340 No alias RAD23 DNA repair protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.017G114000 No alias Rad23 UV excision repair protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006289 nucleotide-excision repair IEA InterProScan predictions
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 76
IPR015360 XPC-bd 241 296
IPR015940 UBA 142 180
IPR015940 UBA 321 357
No external refs found!