Sopen03g037110

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g037110
Cluster	HCCA clusters: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16759	No alias	ethylene-responsive transcription factor erf012	0.02	Orthogroups_2024-Update
A4A49_21566	No alias	ethylene-responsive transcription factor erf087	0.03	Orthogroups_2024-Update
A4A49_36962	No alias	ethylene-responsive transcription factor erf003	0.03	Orthogroups_2024-Update
At2g38340	No alias	Dehydration-responsive element-binding protein 2E...	0.03	Orthogroups_2024-Update
At3g15210	No alias	Ethylene-responsive transcription factor 4...	0.03	Orthogroups_2024-Update
At5g51990	No alias	C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]	0.03	Orthogroups_2024-Update
Bradi3g50630	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A00511.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G080516	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Glyma.02G181600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os03g09170	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g10410	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28440	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10274g0010	No alias	(at5g13330 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
Potri.007G043400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.008G215600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G075600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s1_34V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s7_352V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.3G291500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G060700.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G481400.1	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	Orthogroups_2024-Update
Sobic.004G084600.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.03	Orthogroups_2024-Update
Solyc02g090800	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc03g117130	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc09g091950	No alias	Ethylene-responsive transcription factor ERF062 (AHRD...	0.02	Orthogroups_2024-Update
Sopen08g026910	No alias	AP2 domain	0.06	Orthogroups_2024-Update
Sopen10g004890	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen10g030870	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	86	135

External Links

No external refs found!

Sopen03g037110

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation