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  5. Sopen03g037240

Sopen03g037240


Description : AAA domain (Cdc48 subfamily)


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g037240
Cluster HCCA clusters: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44335 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Bradi3g44341 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Cre12.g533351 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Cre43.g760497 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
GRMZM2G009443 No alias CLPC homologue 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G076190.4 No alias cytosolic chaperone *(Hsp101) 0.02 Orthogroups_2024-Update
HORVU6Hr1G028690.3 No alias organellar chaperone *(Clp-p/Clp-m) 0.03 Orthogroups_2024-Update
PSME_00005341-RA No alias (q6f2y7|hs101_orysa : 1383.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
Pp1s23_102V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Pp1s252_87V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
evm.model.contig_3516.2 No alias (at1g74310 : 794.0) Encodes ClpB1, which belongs to the... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 637 811
IPR019489 Clp_ATPase_C 818 898
IPR004176 Clp_N 184 235
IPR004176 Clp_N 108 160
IPR003959 ATPase_AAA_core 299 415
No external refs found!