Sopen03g037310

Description : NF-X1 type zinc finger

Gene families : OG_42_0001857 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001857_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g037310
Cluster	HCCA clusters: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
A4A49_08698	No alias	nf-x1-type zinc finger protein nfxl1	0.04	Orthogroups_2024-Update
Bradi2g00226	No alias	sequence-specific DNA binding transcription factors;zinc...	0.03	Orthogroups_2024-Update
Glyma.11G230200	No alias	sequence-specific DNA binding transcription factors;zinc...	0.03	Orthogroups_2024-Update
MA_43386g0010	No alias	(at1g10170 : 696.0) Encodes AtNFXL1, a homologue of the...	0.03	Orthogroups_2024-Update
Pp1s215_60V6	No alias	nuclear transcription x-box binding 1	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000967	Znf_NFX1	542	559
IPR000967	Znf_NFX1	388	405
IPR000967	Znf_NFX1	504	515
IPR000967	Znf_NFX1	684	702
IPR000967	Znf_NFX1	271	286
IPR000967	Znf_NFX1	652	667
IPR000967	Znf_NFX1	446	463
IPR000967	Znf_NFX1	324	341

External Links

No external refs found!

Sopen03g037310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation