Sopen03g037680

Description : Membrane transport protein

Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g037680
Cluster	HCCA clusters: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
HORVU3Hr1G094000.5	No alias	auxin efflux transporter (PIN) & auxin transporter (PIN)	0.02	Orthogroups_2024-Update
PSME_00016874-RA	No alias	(at1g70940 : 775.0) A regulator of auxin efflux and...	0.03	Orthogroups_2024-Update
Seita.4G101300.1	No alias	auxin efflux transporter (PIN) & auxin transporter (PIN)	0.02	Orthogroups_2024-Update
Seita.7G323600.1	No alias	auxin efflux transporter (PIN) & auxin transporter (PIN)	0.02	Orthogroups_2024-Update
Solyc03g118740	No alias	SlPIN1	0.03	Orthogroups_2024-Update
Sopen10g031390	No alias	Membrane transport protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004776	Mem_trans	9	606

External Links

No external refs found!