1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g037790

Sopen03g037790


Description : Ring finger domain


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g037790
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_05648 No alias putative e3 ubiquitin-protein ligase hip1 0.03 Orthogroups_2024-Update
A4A49_16231 No alias e3 ubiquitin-protein ligase mbr1 0.01 Orthogroups_2024-Update
A4A49_23702 No alias putative e3 ubiquitin-protein ligase hip1 0.08 Orthogroups_2024-Update
Bradi5g24120 No alias RING/U-box superfamily protein 0.07 Orthogroups_2024-Update
Brara.E02634.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G03241.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G053909 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G165044 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G174926 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G843389 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G075400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G241900 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Glyma.06G076600 No alias RING/U-box superfamily protein 0.07 Orthogroups_2024-Update
Glyma.06G234300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G049400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G158500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G018800.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Potri.001G304900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.007G045500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G100100 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Seita.4G247100.1 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.04 Orthogroups_2024-Update
Seita.5G263300.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.7G226600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G061900.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G205100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc03g118840 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) 0.1 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 338 380
No external refs found!