Sopen03g038730

Description : C3HC zinc finger-like

Gene families : OG_42_0001622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001622_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g038730
Cluster	HCCA clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
At1g17210	No alias	F20D23.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SHI0]	0.02	Orthogroups_2024-Update
GRMZM2G044343	No alias	C3HC zinc finger-like	0.02	Orthogroups_2024-Update
PSME_00040532-RA	No alias	(at1g17210 : 744.0) IAP-like protein 1 (ILP1); FUNCTIONS...	0.03	Orthogroups_2024-Update
Sobic.001G066500.6	No alias	regulatory protein *(ILP) of Programmed Cell Death	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012935	Znf_C3HC-like	69	193

External Links

No external refs found!